Proteins induced by telomere dysfunction are associated with human IgA nephropathy#

Proteins induced by telomere dysfunction are associated with human IgA nephropathy # # 端粒缺陷相关因子和人类IgA肾病的关系 1 first-author 1 1 2 1 1 1 1 1 corresp ‡Corresponding Author ‡Corresponding Author †E-mail:annie_jh2000@aliyun.com †E-mail:annie_jh2000@aliyun.com annie_jh2000@aliyun.com Kidney Disease Center, the First Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou 310003, China Kidney Disease Center, the First Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou 310003, China Institute of Aging Research and Max-Planck-Research Group on Stem Cell Aging, Hangzhou Normal University, Hangzhou 311121, China Institute of Aging Research and Max-Planck-Research Group on Stem Cell Aging, Hangzhou Normal University, Hangzhou 311121, China Aging is one of the contributing risk factors for kidney diseases. Accumulating evidence prompts the view that telomere length in kidney tissue cells is an indicator for organismal aging. Previously identified aging markers (cathelin-related antimicrobial peptide (CRAMP), stathmin, elongation factor-1α (EF-1α), and chitinase) were associated not only with telomere driven aging in mice but also with human aging and chronic diseases. This study focuses on the relationship between these biomarkers and IgA nephropathy (IgAN) progression in the Chinese population. For 260 individuals, the four markers are determined in blind datasets using direct enzyme-linked immunosorbent assay (ELISA) and immunofluorescence staining. The expression levels of CRAMP and chitinase increased in blood plasma, urine, and kidney tissues during human IgAN progression. And for the other nephropathy, such as systemic lupus erythematosus (SLE), diabetic nephropathy (DN), and focal segmental glomerulosclerosis (FSGS), there is no protein upregulation with telomere shortening. Moreover, a combination of CRAMP and chitinase can distinguish patients with IgAN from healthy individuals with 88.2%/92.5% (plasma) and 74.3%/84.2% (urine) sensitivity/specificity. These data provide the experimental evidence that telomere shortening and related inflammatory proteins are associated with human IgAN, and it could be a new direction for the disease progression study. 研究目的 2 分析在中国人群中，端粒缩短以及相关衰老因子与人类IgA肾病发生进展的关系。 创新要点 2 目前的研究发现，端粒功能缺陷是限制分裂增殖、细胞衰老的重要分子机制。它不仅仅与衰老相关，而且在疾病的发生、进展过程中都有直接影响。肾脏的正常衰老过程伴随端粒逐渐缩短，端粒功能缺陷可以加速慢性肾脏疾病进程，并伴随相关衰老因子cathelin相关抗菌肽（CRAMP）、延长因子-1α（EF-1α）、几丁质酶（chitinase）和微管不稳定蛋白（stathmin）等表达增加。本项研究首次在中国人群中，揭示端粒缩短以及相关衰老因子与人类IgA肾病发生进展的关系。 研究方法 2 采用双盲法，以IgA肾病患者（ n =177）为实验组，以狼疮肾炎（ n =50）、糖尿病肾病（ n =30）和局灶节段性肾小球硬化（ n =30）病人以及健康人（ n =83）为对照组，通过定量荧光原位杂交（qFISH）检测了肾脏组织的端粒长度，并通过酶联免疫吸附试验（ELISA）检测了血液、尿液中的CRAMP、EF-1α、stathmin的含量，运用几丁质酶试剂盒（CS1030）检测了血液、尿液中几丁质酶的酶活性，运用免疫荧光染色检测了组织中CRAMP的表达情况。 重要结论 2 端粒缩短和相关炎症蛋白与IgA肾病的发生发展有关，并为IgA肾病的特异性诊断和及预后评估提供可靠的研究基础。 Biomarkers Telomere IgA nephropathy (IgAN) 生物标志物 端粒缩短 IgA肾病 Introduction 1 IgA nephropathy (IgAN), characterized by immunoglobulin A depositing in the glomeruli (Berger and Hinglais, 1968 1968 ; Woodroffe et al., 1980 1980 ; Lee et al., 1982 1982 ), is one of the major causes leading to renal failure (Cagnoli et al., 1985 1985 ; Imai et al., 1985 1985 ; Coppo et al., 1986 1986 ). In humans, telomere shortening takes place in many tissues with age, and is accelerated in chronic diseases (Jiang et al., 2007 2007 ). However, the contributing role of telomere dysfunction in human kidney disease was still unclear. Telomere length shortened during renal aging, especially in the cortex (Melk et al., 2000 2000 ). By activating the DNA damage responses, the telomere defect restricts the proliferative capacity of human cells, inducing senescence or apoptosis instead. Aging kidneys are significantly affected by the structural and functional changes, which leads to the reduction in glomerular filtration rate (GFR), a decline in renal hemodynamic and functional reserves, decreased sodium excretion and potassium clearance, diminished urinary concentration and diluting ability, susceptibility to drug toxicity, impaired endocrine function, and so on. Aging, being a complex process, involves a series of cross-linking molecular pathways. Understanding the molecular mechanism of the physiological or pathological aging process of kidneys could shed light on the clinical approaches to slow down renal aging and treat nephropathy. Several aging markers have been identified in renal aging (Halloran and Melk, 2001 2001 ; Melk et al., 2004 2004 ). For convenient clinical use, more relevant biomarkers need to be detected not only in kidney tissue but also in urine and blood. Previously, we have found that four proteins [cathelin-related antimicrobial peptide (CRAMP), stathmin, elongation factor-1α (EF-1α), and chitinase] were upregulated in telomere-dysfunctional mice. In geriatric population with aging-associated disorders and chronic diseases such as myelodysplastic syndrome (MDS) and liver cirrhosis, these proteins are positively regulated. However, there have been no reports on the relationship between the accumulation of these markers and the progression of IgAN. To further evaluate the conception that telomere attrition and aging process are interconnected to provoke human aging and disease, we investigated the association between these telomere shortening related markers and chronic kidney disease, IgAN, and we assessed the prognostic value of these markers for the progression of nephropathy in the renal biopsy, urine, and blood. Materials and methods 1 Subjects 2 In this study, all IgAN patients ( n =177) and normal human ( n =83) controls provided blood, urine, and organ samples. The patients of IgAN are grouped depending on Lee’s grading system: IgAN I–II including grades I and II show normal or mild pathological changes such as focal or diffuse mesangial cell proliferation, and < 25% of glomeruli with segmental sclerosis (SS)/global sclerosis (GS)/crescent (Cr); IgAN III+, which show obvious pathological changes and clinical disease progression, represent grades III, IV, and V, > 25% of glomeruli with Cr/SS/GS, poorer kidney function, and large quantitative proteinuria. IgAN III+ patients have the worst kidney function compared with the controls and IgAN I–II. They show a higher concentration of serum creatinine, a lower modification of diet in renal disease (MDRD), and a higher proteinuria (Table 1 1 ). Healthy kidney tissues were obtained from 20 living kidney transplantation donors with written consent, and they show the longest telomere length in the three groups. There are 50 patients with systemic lupus erythematosus (SLE), and they were grouped depending on clinical symptoms and pathological changes: SLE I–III as the normal and mild groups; SLE IV–V as the progressed group. There were 30 patients with diabetic nephropathy (DN), and they were grouped depending on clinical symptoms and pathological changes into the early pathological change group or, with late pathological change, into the progressed group. There were 30 patients with focal segmental glomerulosclerosis (FSGS), and they were grouped depending on clinical symptoms and pathological changes into the early pathological change group or, with late pathological change, into the progressed group. Data are expressed as mean±SD, except for gender Group n Age (year) Gender (male/female) Serum creatine (μmol/L) Proteinuria (g/d) MDRD Control 83 35.3±9.9 44/39 70.6±12.6 96.8±15.6 IgAN I–II 74 34.0±10.9 35/39 74.5±16.3 1.0±1.0 95.9±21.8 IgAN III+ 103 36.0±13.7 52/50 124.0±91.0 1.9±1.3 49.7±18.5 SLE I–III 30 38.2±8.9 4/26 75.1±11.1 92.1±14.5 SLE IV–V 20 39.0±10.2 3/17 124.5±46.1 1.2±1.3 45.9±22.9 DN early change 20 35.2±11.2 9/11 74.0±22.0 99.7±12.9 DN late change 10 36.7±10.8 4/6 129.1±51.6 1.8±1.2 42.3±19.9 FSGS early change 20 37.1±9.5 9/11 78.5±19.6 90.3±18.2 FSGS progressed change 10 39.1±10.1 4/6 131.4±60.8 2.1±1.3 47.5±18.6 Direct enzyme-linked immunosorbent assay (ELISA) 2 The MicroWell plates (Nunc) were coated with the standard protein [CRAMP 100, 50, 25, 12.5, 6.25, 3.125, 1.6 and 0 ng, and 100 μl plasma (two-fold dilution)], and then incubated overnight at 4 °C. After three washes with phosphate buffered saline with Tween 20 (PBST), the p lates were incubated with the first antibody [CRAMP (Cell Signaling) 1:100 (v/v), EF-1α (Upstate) 1:1000 (v/v), and stathmin (Cell Signaling Technology) 1:1000 (v/v)] for 2 h at ambient temperature or overnight at 4 °C, and then washed three times with PBST again. Horseradish peroxidase (HRP)-hapten conjugate secondary antibody 100 μl per well was applied, and the plates were incubated at room temperature for 60 min and washed five times with PBST. Then 0.1 ml of tetramethylbenzidine peroxide-based substrate solution was added to every well. The color reaction was developed for 30 min, and then stopped with the addition of 50 μl/well of 2 mol/L H 2 SO 4 stop solution. The plate was read in the microplate reader in dual-wavelength mode (450–540 nm). The human CRAMP ELISA kit (HK321) we used is from Cell Sciences. Chitinase activity 2 We analyzed chitinase activity with a chitinase assay kit (CS1030) purchased from Sigma. A 3-μl mixture of plasma and substrate solution (4-methylumbelliferone) was applied for each reaction. The enzyme activity was determined by using fluorimetry at an excitation wavelength of 360 nm and an emission wavelength of 450 nm. All samples were analyzed in triplicate. Quantitative fluorescence in situ hybridization (qFISH) 2 qFISH was performed as described by Licastro et al. ( 2003 2003 ) on 5-μm thick paraffin sections of small intestine and methanol/acetic-acid fixed bone marrow cells, respectively. Telomere length was analyzed from the nuclei of the kidney cells using TFL-Telo Software from Peter Lansdorp. Immunofluorescence staining for CRAMP 2 The expression of CRAMP was detected by immunofluorescence staining on 4-μm thick paraffin sections of kidney. After deparaffinization and rehydration, the sections were permeabilized in 1 mmol/L sodium citrate buffer for antigen retrieval. Primary antibody, CRAMP (1:100 (v/v) dilution; Cell Signaling), was applied for 2 h at room temperature or 4 °C overnight. The secondary antibody we used was anti-mouse Cy3-Zymed (1:200 (v/v)). Statistical analysis 2 We used MedCalc software package (MedCalc for Windows 8.1.1.0), SPSS 16.0, and GraphPad Prism to perform statistical analysis. Normal distribution of the data was evaluated by the one-sample Kolmogorov-Smirnov test. Average values were presented with mean±standard deviation (SD) or median as appropriate. P values were generated by the unpaired Student’s t -test for all of the datasets. Results 1 Healthy individuals (controls, n =83) and patients with IgAN ( n =177) are matched in age and gender (Table 1 1 ). There are significant differences in serum creatine, proteinuria, and MDRD between IgAN I–II and IgAN III+ patients ( P values are 0.004, 0.032, and 0.004, respectively). Patients with SLE ( n =50), diabetic nephropathy ( n =30), and FSGS ( n =30) are all matched in age and gender (Table 1 1 ). There are also significant differences in serum creatine, proteinuria, and MDRD between SLE I–III and IV–V patients ( P =0.021), between DN early change and late change ( P =0.030), between FSGS early change and progressed change ( P =0.033). Data on blood and urine biochemistry at baseline were available for all healthy individuals, and data on kidney histology were obtained from 20 living kidney transplantation donors with written consent. Telomere length in different patients 2 Telomere length was determined in all IgAN, SLE, DN, and FSGS patients. Data on kidney histology were available from all patients, and data on blood and urine biochemistry at the baseline (time of biopsy) were available from all patients. The patients with IgAN III+ have the shortest telomere length compared with the controls ( P =0.030; Fig. 1 1 ) and the IgAN I–II group. Patients with IgAN I–II have a shorter telomere length compared with the healthy controls, although the P value does not reach a statistical significance ( P =0.052; Fig. 1 1 ). Telomere length has no significant difference between patients with SLE I–III and IV–V, between patients with early DN and the late pathological change group, between patients with early FSGS and the progression group. Bars to the left side of the vertical line represent cells with critically short telomeres; the percentage of such cells is indicated Expression levels of biomarkers in blood plasma 2 ELISA is used to detect plasma samples and urine samples from all subjects, and internal standards are applied to normalize the data. In blood plasma, the expression level of CRAMP ( P < 0.0001; Fig. 2a 2a ) and the level of chitinase activity ( P =0.0001; Fig. 2b 2b ) are higher in the patients with IgAN I–II than in the controls, whereas the differences in EF-1α and stathmin expression levels are not significant between these two groups. There is a further increase in plasma levels of CRAMP ( P =0.0028) and chitinase activity ( P < 0.0001) in the patients with IgAN III+ compared with the IgAN I–II group. Multivariate analysis indicated that the expression level of CRAMP ( A ) and chitinase activity ( B ) have the best discriminatory power (combination score=0.434 A +0.009 B ; Table S1 S1 ) and the combination of these two markers has the highest statistical power to discriminate between the three groups (Figs. 2c and 2d 2c and 2d ). Plasma protein expression shows no significant difference between the patients with SLE I–III and IV–V, between the patients in early DN and late pathological change groups, between the patients in early FSGS and progressed pathological change groups. The dot plots show the levels of the indicated marker proteins in human blood plasma as measured by ELISA for CRAMP concentration (a), chitinase activity (b) (note that CRAMP concentration and chitinase activity were up-regulated in the mild and moderate IgAN groups step by step compared with the healthy group), and a combined analysis (c) of the best two markers (CRAMP and chitinase) according to the regression analysis (Table S1 S1 ) on the same set of sample Expression levels of biomarkers in urine 2 In urine, the expression level of CRAMP ( P < 0.0001; Fig. 3a 3a ) and the level of chitinase activity ( P =0.0049; Fig. 3b 3b ) are higher in the patients with IgAN I–II than in controls, whereas the differences in EF-1α and stathmin expression levels are not significant between these two groups. There is a further increase in the urine level of chitinase activity ( P < 0.0001) in the patients with IgAN III+. However, for CRAMP ( P =0.6548), EF-1α, and stathmin, the differences are not significant between the patients with IgAN I–II and IgAN III+. Multivariate analysis indicated that the expression level of CRAMP ( A ) and chitinase activity ( B ) have the best discriminatory power (combination score=0.326 A +0.008 B ; Table S2 S2 ) and a combination of these two markers has the highest statistical power to discriminate between the three groups (Figs. 3c and 3d 3c and 3d ). There is no statistical difference in urine protein expression between the patients with SLE I–III and IV–V, between the patients in early DN and the late pathological change groups, between the patients in early FSGS and the progression groups. The dot plots show the levels of the indicated marker proteins in human urine as measured by ELISA for CRAMP concentration (a), chitinase activity (b) (note that the two marker proteins were up-regulated in the mild and moderate IgAN groups step by step compared with healthy group), and a combined analysis (c) of the best two markers (CRAMP and chitinase) according to the regression analysis (Table S2 S2 ) on the same set of sample Expression levels of CRAMP protein by immunofluorescence staining 2 Immunofluorescence staining confirmed the up-regulation of CRAMP protein levels in the patients with IgAN III+ (Fig. 4 4 ). The percentage of CRAMP positive cells in IgAN III+ patients is higher than that in IgAN I–II patients ( P =0.031) and controls ( P =0.016). (a) Representative immunohistochemistry staining of CRAMP in post mortem kidney biopsies of unaffected, healthy controls (live doner of kidney transplantation, n =20) compared with unaffected, IgAN I–II and IgAN III+ patients; (b) The percentage of organ cells that are positive staining for CRAMP in the kidneys Relationship between the expression levels of biomarkers and MDRD 2 In blood plasma and urine, the expression levels of CRAMP, EF-1α, and stathmin, and chitinase activity (Figs. S1 S1 and S2 S2 ) do not correlate with MDRD. The combination scores of CRAMP and chitinase activity also do not correlate with MDRD (Figs. S1e S1e and S2e S2e ). Discussion 1 In this study, we have found that telomere shortening and aging markers are associated with the progression of IgAN, and not associated with the progression of SLE, DN, or FSGS. Previously, we have found that these biomarkers increased in humans with liver cirrhosis or myelodysplatic syndrome diseases, which also proved to be associated with telomere shortening (Ohyashiki et al., 1994 1994 ; Wiemann et al., 2002 2002 ). Telomere dysfunction provokes defects in the microenvironment and macroenvironment in vivo , by increasing the expression of various cytokines such as granulocyte colony-stimulating factor (G-CSF) in the plasma. As a result, the function of bone marrow stromal cells is impaired and functional hematopoietic stem cells are reduced as well (Ju et al., 2007 2007 ). It is reported that telomeres appear to be especially sensitive to chronic oxidative stress, since telomere length is decreasing at a faster speed during the accumulation of reactive oxygen species (ROS) induced 8-oxodG DNA-strand breaks (Houben et al., 2008 2008 ). Therefore, evaluation of telomere length might be an effective biomarker for disease progression (Houben et al., 2008 2008 ). Since the renal function can be evaluated relatively easily in clinical practice and has been quantified in longitudinal studies, it is no surprise that kidney aging has become a general model for organ aging (Lindeman et al., 1985 1985 ). The phenotype of human renal senescence can represent a phenotype of mass, particularly in the cortex (Takubo et al., 2002 2002 ). There are some reports that have examined the relationship between kidney aging and telomere dysfunction (Lindeman et al., 1985 1985 ; Lindeman, 1986 1986 ; Gourtsoyiannis et al., 1990 1990 ; Takubo et al., 2002 2002 ; von Schnakenburg et al., 2002 2002 ), and chronic renal disease is also influenced by telomeres triggering aging (Melk et al., 2003 2003 ; Tchakmakjian et al., 2004 2004 ; Szeto et al., 2005 2005 ). In IgAN patients, the combination scores of these four markers in the plasma and urine were up-regulated in the IgAN I–II patients and further up-regulated in the IgAN III+ patients, which were linked to telomere attrition. Probably, telomere shortening induces alterations in the function of cells and organs by up-regulating the expression of secreted proteins during human aging and chronic disease. Szeto et al. ( 2005 2005 ) showed that the chromosomal telomere of kidney cells shortened in IgAN by the measurement of DNA in the urinary sediment. The overexpression of the aging marker p16 in the aging renal and chronic kidney disease has been reported to be correlated with telomere dysfunction (Melk et al., 2003 2003 ; Szeto et al., 2005 2005 ; Jiang et al., 2007 2007 ; Zhou et al., 2008 2008 ). We also found that the discrimination power of these markers measured in plasma was better than that measured in urine samples. One of the reasons could be that the concentrations of these proteins were much lower in urine than in plasma. It is also reported that there is a loss of renal function, characterized by increased renovascular resistance, reduced effective renal plasma flow (RPF), and decreased filtration fraction (Lindeman et al., 1985 1985 ; Lindeman, 1986 1986 ; Melk et al., 2005 2005 ). However, in our current study, we could not find the correlation between these marker proteins and the renal function. We have found a trend for CRAMP/chitinase correlating with MDRD. Larger cohorts and longer follow-up clinical research need to be designed to fully address this question. CRAMP and chitinase are active during innate immune responses in inflammatory diseases such as asthma, allergy, and parasitic infections (Fliser et al., 1993 1993 ; Nizet et al., 2001 2001 ). The activation of innate immunity potentially triggers the onset of decreased longevity and age-related inflammatory diseases like atherosclerosis (Reese et al., 2007 2007 ; Vasto et al., 2007 2007 ). Some studies suggest that telomere depletion involves the activation of innate immunity during human aging and chronic disease. The expression levels of these markers were significantly high in kidney tissues, and the positive staining was positioned in the renal interstitium. That is also combined with the pathological phenotype of serious IgAN with interstitial fibrosis and inflammatory cell infiltration. We hypothesized that DNA damage and telomere shortening triggered a higher expression of CRAMP and CRAMP stimulated the inflammatory cell infiltration, and that these could be correlated with renal disease, and redesigned the project to find something interesting. The degree of DNA damage and telomere shortening varies in different diseases. In this paper, we found that the difference in telomere shortening was not significant in FSGS, SLE, or DN progression, probably because the DNA damage was not serious enough for qFISH to catch. It means that the mechanisms of SLE (immune system disorder), DN (glucose metabolic dysfunction), and FSGS (podocytopathy with reduction in podocytes density) diseases are different from that of IgAN. In summary, the results reveal that IgAN is associated with the increase in secreted proteins due to telomere attrition. These findings are in consistence with previous studies respecting telomere dysfunction in kidney aging and nephropathy (Melk et al., 2003 2003 ; Tchakmakjian et al., 2004 2004 ; Szeto et al., 2005 2005 ; Jiang et al., 2007 2007 ; Zhou et al., 2008 2008 ). The recently identified biomarkers can be described as an effective indicator of human IgAN progression correlated with telomere dysfunction. References J Berger , N Hinglais . Intercapillary deposits of IgA-IgG . 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Kidney Int , 2008 . 74 ( 6 ): 710 - 712 . 18614996 DOI: 10.1038/ki.2008.319 http://doi.org/10.1038/ki.2008.319 . The aging kidney Compliance with ethics guidelines Ying-ying LU, Xian YANG, Wen-qing CHEN, Zhen-yu JU, Zhang-fei SHOU, Juan JIN, Xiao-hui ZHANG, Jiang-hua CHEN, and Hong JIANG declare that they have no conflict of interest. All procedures followed were in accordance with the ethical standards of the responsible committee on human experimentation (institutional and national) and with the Helsinki Declaration of 1975, as revised in 2008 (5). Informed consent was obtained from all patients for being included in the study. Additional informed consent was obtained from all patients for which identifying information is included in this article. 10.1631/jzus.B1300115 Project supported by the National Basic Research Program (973) of China (Nos. 2011CB944002 and 2012CB517603), the National Natural Science Foundation of China (No. 2011BAI10B07), and the Major Special Project of Technology Office in Zhejiang Province (No. 2012C13G2010133), China 2013-04-16 2014-05-16 2013-08-15 2022-01-05 Copyright © Zhejiang University and Springer-Verlag Berlin Heidelberg 2014 2014 Journal of Zhejiang University-SCIENCE B (Biomedicine and Biotechnology) 06 15